Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015788966.1_cds_XP_016491925.1_770
CDS Infomation

[gene=LOC107811414] [db_xref=GeneID:107811414] [protein=putative late blight resistance protein homolog R1B-16 isoform X2] [protein_id=XP_016491925.1] [location=complement(join(39592..39595,40558..41750))] [gbkey=CDS]
Sequence

ATGGTTAGAAGCAGGAGATGGGATGGTGAGTGTAAAACATTTGGTGTCCATGATCTGGTG
CGGGACTTGATTCTAAGAGTAGCTAATGATGAGAAGTTCCTGCAGGTCTCTAGAATTCAG
GTAGCCACTAATCCTTCAGCGAACAAGTTTCATGTTCGTCGCTACAGTTACTCTTCGCGC
ATTTATGATGACGACGATTTACGTGAGTCATCATCTAGTAACACCCGAACTTTGCACTTC
TTCTATGGATTGAATAACGATTCTCTTTTGGGGCGCTTCAAACTTCTAAGAGTGTTGGCA
ATCCTTGACTGTACATTTCATTATTTTCCCCTTGTGATAAAAAAATTAGTACATCTCAGA
TACCTTCACATATTCAACTGTCACGAGGACATTCACAGTTCAGTGTCAGAGCTTTATAAT
CTGCAGACCTTGATTTTTGGCCAATATTCTGGTTTATCAGTGGAGATCTGGAAGATGAAA
CTTTTGAGGCATGTTGAGATAAAAGGGATCTCTGATTTTTGTGTTCCATCAAGTAAGGAA
GGGTCTAGTTTCAAGCTACAAAATCTTGAGCATCTGTCATATCTAAAAATTTCTTGCTGT
ACTGAGAAGTTGTTTTCTGATATTCCAAATCTAAAGACTCTGAAAATTTATGGTGCCAAA
GGAGATATAACTTCCGAGCTAAATAGCCTTTCTTGTTTAAATAAACTTGAAACATTGAAG
ATCGCCTGCAACCGAAGATATTACGAGCGACCACCGCAAAGTAAGTTTGCATTGCCTACA
TCTCTGAAGAGGTTGACTTTAGAAAGTACTTATTTACCATGGGAAGACATGGCGAATATT
GTAATGTTGCCAAACCTCCAAGTGCTTAAAATTAAAGACAATGGATTTGATGGTGATGTA
TGGAGACTGAATGATGAAATGATTTTTAATCAACTTAAGTTCCTCCTAATCTATGAGACA
AATCTGAAGCAGTGGAAAGCTGGCAGCGTTAACTTTCCAGAACTGCAATGCCTAGTTCTG
AAAGAATGCAGATCCCTGAAGACAATCCCTCAAGACATTGGGGAAATTTATACCTTGGAG
TCAATAGAGTTGCATAATTGCAGCACTTCGGCTGAAAAATCTGTGAAAAATATTCAAAAA
GAGCAAAAGAGCATGGGGAATGATTGCCTCACTGTACTCATCAATAGTCGTCGGTAA

Peptide Sequence

PEP ID

XP_016491925.1
PEP Infomation

PREDICTED: putative late blight resistance protein homolog R1B-16 isoform X2 [Nicotiana tabacum]
Sequence

MVRSRRWDGECKTFGVHDLVRDLILRVANDEKFLQVSRIQVATNPSANKFHVRRYSYSSR
IYDDDDLRESSSSNTRTLHFFYGLNNDSLLGRFKLLRVLAILDCTFHYFPLVIKKLVHLR
YLHIFNCHEDIHSSVSELYNLQTLIFGQYSGLSVEIWKMKLLRHVEIKGISDFCVPSSKE
GSSFKLQNLEHLSYLKISCCTEKLFSDIPNLKTLKIYGAKGDITSELNSLSCLNKLETLK
IACNRRYYERPPQSKFALPTSLKRLTLESTYLPWEDMANIVMLPNLQVLKIKDNGFDGDV
WRLNDEMIFNQLKFLLIYETNLKQWKAGSVNFPELQCLVLKECRSLKTIPQDIGEIYTLE
SIELHNCSTSAEKSVKNIQKEQKSMGNDCLTVLINSRR

Transcript Sequence

Gene sequence data has not been registered.